<?xml version="1.0" encoding="UTF-8"?>
<!-- $Id: gt_submission_schema-invalid.xml,v 1.6 2003/11/04 15:05:16 mummi Exp $ -->
<genotype_submission lsid="urn:lsid:dcc.hapmap.org:Batch:004777:1"
  xmlns="http://www.hapmap.org"
  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" 
    xsi:schemaLocation="http://www.hapmap.org http://www.hapmap.org/xml-schema/2003-11-04/hapmap.xsd">
  <batch_info>
    <class>NEW</class>
    <date_created>2003-09-22</date_created>
    <contact>
      <name>Gudmundur A. Thorisson</name>
      <email>mummi@cshl.org</email>
    </contact>
    <comment> This is a test submission file that contains well-formed but
      schema-invalid genotype XML. This file should throw and error at the
      upload-processing stage and never make into the tracking database. Last
      updated: $Date: 2003/11/04 15:05:16 $</comment>
  </batch_info>
  <genotypes protocol="urn:lsid:sanger.hapmap.org:Protocol:genot_prot-sequenom-19:1">
    <mummi_ROX_bad_element/>
    <genotype_set assay="urn:lsid:sanger.hapmap.org:Assay:3344432:1" panel="urn:lsid:dcc.hapmap.org:Panel:CEPH-30-trios:1">
      <batch type="plate">my_plate_barcode_or_similar_00000434222</batch>
      <status>
        <pass/>
      </status>
      <!-- 95 genotypes MUST be present, failed/missing as N's -->
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12003:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12003:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12004:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10838:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12005:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12006:1"/>
      <genotype allele1="N" allele2="N" sample="urn:lsid:dcc.hapmap.org:Sample:NA10839:1"/>
      <genotype allele1="N" allele2="N" sample="urn:lsid:dcc.hapmap.org:Sample:NA12056:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12057:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10851:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11829:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11830:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10856:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11831:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11832:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10855:1"/>
      <genotype allele1="N" allele2="N" sample="urn:lsid:dcc.hapmap.org:Sample:NA11992:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11993:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11993:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10860:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11994:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11995:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10861:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12154:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12236:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10830:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12155:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12156:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12156:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10831:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07357:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07345:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07348:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA06994:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07000:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07029:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07022:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07056:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07019:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11839:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11840:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10854:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12043:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12044:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10857:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12144:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12145:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10846:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12146:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12239:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10847:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12264:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12234:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10863:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12716:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12717:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12707:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12891:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12892:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12878:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12812:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12813:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12801:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12814:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12815:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12802:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12872:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12873:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12864:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12874:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12875:1"/>
      <genotype allele1="T" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12865:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12760:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12761:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12752:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12762:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12763:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12753:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07034:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07055:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA07048:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA06993:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA06993:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA06985:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA06991:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12750:1"/>
      <genotype allele1="C" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12751:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12740:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA11881:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA11882:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10859:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12248:1"/>
      <genotype allele1="C" allele2="C" sample="urn:lsid:dcc.hapmap.org:Sample:NA12248:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA12249:1"/>
      <genotype allele1="T" allele2="T" sample="urn:lsid:dcc.hapmap.org:Sample:NA10835:1"/>
    </genotype_set>
    <!-- many more genotype sets -->
  </genotypes>
</genotype_submission>
